Hierarchy For Package uk.ac.roslin.ensembl.datasourceaware.core

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • org.biojava3.core.sequence.template.AbstractSequence<C> (implements org.biojava3.core.sequence.template.Sequence<C>)
    • org.biojava3.core.sequence.DNASequence
      • uk.ac.roslin.ensembl.datasourceaware.core.DADNASequence (implements uk.ac.roslin.ensembl.model.core.CoreObject, uk.ac.roslin.ensembl.model.core.DNASequence)
        • uk.ac.roslin.ensembl.datasourceaware.core.DAAssembledDNASequence (implements uk.ac.roslin.ensembl.model.core.AssembledDNASequence)
          • uk.ac.roslin.ensembl.datasourceaware.core.DAChromosome (implements uk.ac.roslin.ensembl.model.core.Chromosome)
        • uk.ac.roslin.ensembl.datasourceaware.core.GapSequence
  • uk.ac.roslin.ensembl.datasourceaware.core.DAAssembly (implements uk.ac.roslin.ensembl.model.core.Assembly)
  • uk.ac.roslin.ensembl.datasourceaware.core.DACoordinateSystem (implements uk.ac.roslin.ensembl.model.core.CoordinateSystem)
  • uk.ac.roslin.ensembl.datasourceaware.core.DAEnsemblDNASequenceReader (implements uk.ac.roslin.ensembl.biojava3.EnsemblDNASequenceReader)
  • uk.ac.roslin.ensembl.datasourceaware.core.DAEnsemblDNASequenceReader.EmptyIterator<NucleotideCompound> (implements java.util.Iterator<E>)
  • uk.ac.roslin.ensembl.datasourceaware.DAObject (implements uk.ac.roslin.ensembl.model.IdentifiableObject)
    • uk.ac.roslin.ensembl.datasourceaware.core.DACoreObject (implements uk.ac.roslin.ensembl.model.core.CoreObject, uk.ac.roslin.ensembl.model.StableID)
      • uk.ac.roslin.ensembl.datasourceaware.core.DAFeature (implements uk.ac.roslin.ensembl.model.core.Feature)
        • uk.ac.roslin.ensembl.datasourceaware.core.DAAnalyzedFeature (implements uk.ac.roslin.ensembl.model.core.Analyzed)
          • uk.ac.roslin.ensembl.datasourceaware.core.DAGene (implements uk.ac.roslin.ensembl.model.core.Gene, uk.ac.roslin.ensembl.model.core.VegaFeature, uk.ac.roslin.ensembl.model.XRefed)
          • uk.ac.roslin.ensembl.datasourceaware.core.DATranscript (implements uk.ac.roslin.ensembl.model.core.Transcript, uk.ac.roslin.ensembl.model.core.VegaFeature, uk.ac.roslin.ensembl.model.XRefed)
        • uk.ac.roslin.ensembl.datasourceaware.core.DAExon (implements uk.ac.roslin.ensembl.model.core.Exon)
      • uk.ac.roslin.ensembl.datasourceaware.core.DAProteinFeature (implements uk.ac.roslin.ensembl.model.core.ProteinFeature)
      • uk.ac.roslin.ensembl.datasourceaware.core.DATranslation (implements uk.ac.roslin.ensembl.model.core.Translation, uk.ac.roslin.ensembl.model.core.VegaFeature, uk.ac.roslin.ensembl.model.XRefed)

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • uk.ac.roslin.ensembl.datasourceaware.core.DAFeature.Status