uk.ac.roslin.ensembl.model.core

Interface Feature

All Superinterfaces:

IdentifiableObject, MappableObject, Serializable

All Known Subinterfaces:

Exon, Gene, Transcript, Variation

All Known Implementing Classes:

DAAnalyzedFeature, DAExon, DAFeature, DAGene, DATranscript, DAVariation

public interface Feature
extends MappableObject

Author:

tpaterso

Method Summary

Methods

Modifier and Type	Method and Description
void	addMappedObjectType(ObjectType mappedType)
Mapping	getChromosomeMapping()
Mapping	getChromosomeMapping(Chromosome chr)
MappingSet	getChromosomeMappings()
Boolean	isCurrent()
Boolean	isObjectTypeMapped(ObjectType mappedType)

Methods inherited from interface uk.ac.roslin.ensembl.model.MappableObject

addMapping, clearAllMappings, getLoadedMappings, getLoadedMappings

Methods inherited from interface uk.ac.roslin.ensembl.model.IdentifiableObject

getDBVersion, getHashID, getId, getSchemaVersion, getType, setId

Method Detail

addMappedObjectType

void addMappedObjectType(ObjectType mappedType)

isObjectTypeMapped

Boolean isObjectTypeMapped(ObjectType mappedType)

isCurrent

Boolean isCurrent()

getChromosomeMapping

Mapping getChromosomeMapping(Chromosome chr)
                             throws NonUniqueException

Throws:

NonUniqueException

getChromosomeMappings

MappingSet getChromosomeMappings()

getChromosomeMapping

Mapping getChromosomeMapping()
                             throws NonUniqueException

Throws:

NonUniqueException