uk.ac.roslin.ensembl.model.variation

Interface Variation

All Superinterfaces:

Feature, IdentifiableObject, MappableObject, Serializable

All Known Implementing Classes:

DAVariation

public interface Variation
extends Feature

Author:

tpaterso

Method Summary

Methods

Modifier and Type	Method and Description
List<String>	getAllSynonyms()
String	getAncestralAllele()
String	getName()
int	getOccurrences()
String	getSynonym()
XRef	getXRef()
Boolean	isFlipped()
Boolean	isSomatic()
void	setName(String name)
void	setSynonym(String altname)

Methods inherited from interface uk.ac.roslin.ensembl.model.core.Feature

addMappedObjectType, getChromosomeMapping, getChromosomeMapping, getChromosomeMappings, isCurrent, isObjectTypeMapped

Methods inherited from interface uk.ac.roslin.ensembl.model.MappableObject

addMapping, clearAllMappings, getLoadedMappings, getLoadedMappings

Methods inherited from interface uk.ac.roslin.ensembl.model.IdentifiableObject

getDBVersion, getHashID, getId, getSchemaVersion, getType, setId

Method Detail

getName

String getName()

setName

void setName(String name)

getXRef

XRef getXRef()

isSomatic

Boolean isSomatic()

isFlipped

Boolean isFlipped()

getAncestralAllele

String getAncestralAllele()

getSynonym

String getSynonym()

getAllSynonyms

List<String> getAllSynonyms()

setSynonym

void setSynonym(String altname)

getOccurrences

int getOccurrences()