Uses of Class
uk.ac.roslin.ensembl.datasourceaware.core.DATranslation

Packages that use DATranslation

Package	Description
uk.ac.roslin.ensembl.dao.database
uk.ac.roslin.ensembl.dao.database.coreaccess
uk.ac.roslin.ensembl.datasourceaware.core
uk.ac.roslin.ensembl.mapper.core

Uses of DATranslation in uk.ac.roslin.ensembl.dao.database

Methods in uk.ac.roslin.ensembl.dao.database that return DATranslation

Modifier and Type	Method and Description
DATranslation	DBSpecies.getTranslationByStableID(String stableID)
DATranslation	DBSpecies.getTranslationByStableID(String stableID, String dbVersion)
DATranslation	DBCollectionSpecies.getTranslationByStableID(String stableID, String dbVersion)

Methods in uk.ac.roslin.ensembl.dao.database that return types with arguments of type DATranslation

Modifier and Type	Method and Description
List<DATranslation>	DBSpecies.getTranslationsForVegaID(String vegaID) Method returns a List of Translations that have been mapped to the given Vega Identifier.
List<DATranslation>	DBSpecies.getTranslationsForVegaID(String vegaID, String dbVersion) Method returns a List of Translations that have been mapped to the given Vega Identifier.
List<DATranslation>	DBCollectionSpecies.getTranslationsForVegaID(String vegaID, String dbVersion) Method returns a List of Translations that have been mapped to the given Vega Identifier.

Uses of DATranslation in uk.ac.roslin.ensembl.dao.database.coreaccess

Methods in uk.ac.roslin.ensembl.dao.database.coreaccess that return DATranslation

Modifier and Type	Method and Description
DATranslation	DBTranslationDAO.getTranslationByID(Integer id)
DATranslation	DBTranslationDAO.getTranslationByStableID(String stableID)

Methods in uk.ac.roslin.ensembl.dao.database.coreaccess that return types with arguments of type DATranslation

Modifier and Type	Method and Description
List<DATranslation>	DBTranslationDAO.getTranslationsForTranscript(Transcript transcript)
List<DATranslation>	DBTranslationDAO.getTranslationsForVegaID(String id) Returns a list of Ensembl Translations matching the query VegaID string.

Uses of DATranslation in uk.ac.roslin.ensembl.datasourceaware.core

Methods in uk.ac.roslin.ensembl.datasourceaware.core that return DATranslation

Modifier and Type	Method and Description
DATranslation	DATranscript.getCanonicalTranslation() Returns the canonical Translation for this Transcript (if there is one).
DATranslation	DAGene.getCanonicalTranslation()

Methods in uk.ac.roslin.ensembl.datasourceaware.core with parameters of type DATranslation

Modifier and Type	Method and Description
protected void	DATranscript.addTranslation(DATranslation trl) Package method to add a Translation to the 'translationHash', hashed on the internal database ID of the Translation, and to set the canonicalTranlation/ID where applicable.

Method parameters in uk.ac.roslin.ensembl.datasourceaware.core with type arguments of type DATranslation

Modifier and Type	Method and Description
void	DATranscript.addTranslations(Collection<DATranslation> trls) Method used by the TranslationDAO to add Translations to the 'translationHash', hashed on the internal database ID of the Translation.

Uses of DATranslation in uk.ac.roslin.ensembl.mapper.core

Methods in uk.ac.roslin.ensembl.mapper.core that return DATranslation

Modifier and Type	Method and Description
DATranslation	TranslationMapper.getTranslation(FeatureQuery query)

Methods in uk.ac.roslin.ensembl.mapper.core that return types with arguments of type DATranslation

Modifier and Type	Method and Description
List<DATranslation>	TranslationMapper.getTranslationsForTranscript(Transcript transcript)
List<DATranslation>	TranslationMapper.getVegaTranslations(String vegaID)