uk.ac.roslin.ensembl.mapper.query

Class FeatureQuery

java.lang.Object

uk.ac.roslin.ensembl.mapper.query.FeatureQuery

public class FeatureQuery
extends Object

Author:

tpaterso

Field Summary

Fields

Modifier and Type	Field and Description
protected Integer	coordinateSystemID
protected Integer	featureID
protected String	featureName
protected String	featureStableID
protected Integer	geneID
protected Integer	maximumFeatureLength
protected Integer	parentSequenceID
protected Integer	parentStart
protected Integer	parentStop
protected List<Integer>	queryIntegerList
protected List<String>	queryStringList
protected Integer	speciesID
protected Integer	transcriptID

Constructor Summary

Constructors

Constructor and Description
FeatureQuery()

Method Summary

Methods

Modifier and Type	Method and Description
String	getComparaDB()
Integer	getCoordinateSystemID()
Integer	getFeatureID() Get the value of featureID
String	getFeatureName()
String	getFeatureStableID() Get the value of featureStableID
String	getFeatureType() Get the value of featureType
Integer	getGeneID() Get the value of geneID
Integer	getMaximumFeatureLength()
Integer	getParentSequenceID() Get the value of parentSequenceID
Integer	getParentStart()
Integer	getParentStop()
List<Integer>	getQueryIntegerList()
List<String>	getQueryStringList()
Integer	getSpeciesID()
Integer	getTranscriptID() Get the value of transcriptID
String	getXdbType() Get the value of xdbType
void	setComparaDB(String comparaDB)
void	setCoordinateSystemID(Integer cordinateSystemID)
void	setFeatureID(Integer featureID) Set the value of featureID
void	setFeatureName(String featureName)
void	setFeatureStableID(String featureStableID) Set the value of featureStableID
void	setFeatureType(String featureType) Set the value of featureType
void	setGeneID(Integer geneID) Set the value of geneID
void	setMaximumFeatureLength(Integer maximumFeatureLength)
void	setParentSequenceID(Integer parentSequenceID) Set the value of parentSequenceID
void	setParentStart(Integer start)
void	setParentStop(Integer stop)
void	setQueryIntegerList(List<Integer> queryIntegerList)
void	setQueryStringList(List<String> queryStringList)
void	setSpeciesID(Integer speciesID)
void	setTranscriptID(Integer transcriptID) Set the value of transcriptID
void	setXdbType(String xdbType) Set the value of xdbType

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

featureID

protected Integer featureID

geneID

protected Integer geneID

transcriptID

protected Integer transcriptID

speciesID

protected Integer speciesID

featureStableID

protected String featureStableID

featureName

protected String featureName

queryStringList

protected List<String> queryStringList

queryIntegerList

protected List<Integer> queryIntegerList

parentSequenceID

protected Integer parentSequenceID

parentStart

protected Integer parentStart

parentStop

protected Integer parentStop

coordinateSystemID

protected Integer coordinateSystemID

maximumFeatureLength

protected Integer maximumFeatureLength

Constructor Detail

FeatureQuery

public FeatureQuery()

Method Detail

getFeatureID

public Integer getFeatureID()

Get the value of featureID

Returns:

the value of featureID

setFeatureID

public void setFeatureID(Integer featureID)

Set the value of featureID

Parameters:

featureID - new value of featureID

getFeatureType

public String getFeatureType()

Get the value of featureType

Returns:

the value of featureType

setFeatureType

public void setFeatureType(String featureType)

Set the value of featureType

Parameters:

featureType - new value of featureType

getXdbType

public String getXdbType()

Get the value of xdbType

Returns:

the value of xdbType

setXdbType

public void setXdbType(String xdbType)

Set the value of xdbType

Parameters:

xdbType - new value of xdbType

getGeneID

public Integer getGeneID()

Get the value of geneID

Returns:

the value of geneID

setGeneID

public void setGeneID(Integer geneID)

Set the value of geneID

Parameters:

geneID - new value of geneID

getTranscriptID

public Integer getTranscriptID()

Get the value of transcriptID

Returns:

the value of transcriptID

setTranscriptID

public void setTranscriptID(Integer transcriptID)

Set the value of transcriptID

Parameters:

transcriptID - new value of transcriptID

getFeatureStableID

public String getFeatureStableID()

Get the value of featureStableID

Returns:

the value of featureStableID

setFeatureStableID

public void setFeatureStableID(String featureStableID)

Set the value of featureStableID

Parameters:

featureStableID - new value of featureStableID

getParentSequenceID

public Integer getParentSequenceID()

Get the value of parentSequenceID

Returns:

the value of parentSequenceID

setParentSequenceID

public void setParentSequenceID(Integer parentSequenceID)

Set the value of parentSequenceID

Parameters:

parentSequenceID - new value of parentSequenceID

getCoordinateSystemID

public Integer getCoordinateSystemID()

setCoordinateSystemID

public void setCoordinateSystemID(Integer cordinateSystemID)

getMaximumFeatureLength

public Integer getMaximumFeatureLength()

setMaximumFeatureLength

public void setMaximumFeatureLength(Integer maximumFeatureLength)

getParentStart

public Integer getParentStart()

setParentStart

public void setParentStart(Integer start)

getParentStop

public Integer getParentStop()

setParentStop

public void setParentStop(Integer stop)

getSpeciesID

public Integer getSpeciesID()

setSpeciesID

public void setSpeciesID(Integer speciesID)

getFeatureName

public String getFeatureName()

setFeatureName

public void setFeatureName(String featureName)

getQueryIntegerList

public List<Integer> getQueryIntegerList()

setQueryIntegerList

public void setQueryIntegerList(List<Integer> queryIntegerList)

getQueryStringList

public List<String> getQueryStringList()

setQueryStringList

public void setQueryStringList(List<String> queryStringList)

getComparaDB

public String getComparaDB()

setComparaDB

public void setComparaDB(String comparaDB)