public interface ChromosomeDAO
Modifier and Type | Method and Description |
---|---|
Chromosome |
getChromosomeByName(String name) |
List<? extends Chromosome> |
getChromosomes() |
AssembledDNASequence |
getFragmentByName(String name) |
List<? extends AssembledDNASequence> |
getFragments() |
Chromosome |
getSexLinkedChromosome(Chromosome chr) |
void |
setAssemblyExceptions(TreeMap<String,? extends Chromosome> chrs) |
Chromosome getChromosomeByName(String name) throws DAOException
DAOException
AssembledDNASequence getFragmentByName(String name) throws DAOException
DAOException
List<? extends Chromosome> getChromosomes() throws DAOException
DAOException
List<? extends AssembledDNASequence> getFragments() throws DAOException
DAOException
Chromosome getSexLinkedChromosome(Chromosome chr) throws DAOException
DAOException
void setAssemblyExceptions(TreeMap<String,? extends Chromosome> chrs) throws DAOException
DAOException
JEnsembl: A Java API for Ensembl Data Access v1.78
© Roslin Institute 2010-14. GNU General Public License, version3