Package uk.ac.roslin.ensembl.model

Interface Summary

Interface	Description
IdentifiableObject
MappableObject
ObjectType
StableID
XRef
XRefed

Class Summary

Class	Description
Coordinate	In general a Coordinate must have a non-null non-zero value for both start and end.
CoordinateSet	Extension of a TreeSet for holding COordinates ordered using their Comparator which orders Coordinate objects by the plus strand start, or the plus strand end if the starts are identical.
Evidence
ExternalDB
GoEvidence
Mapping	Used to be abstract
MappingSet	Used to be abstract with signature public abstract class MappingSet<CLAZZ extends Mapping> extends TreeSet<CLAZZ> implements Serializable {

Enum Summary

Enum	Description
Coordinate.Strand	Public enumeration of the two alternate Strands, FORWARD and REVERSE.