uk.ac.roslin.ensembl.dao.factory

Interface DAOVariationFactory

All Superinterfaces:

DAOFactory, DAOSingleSpeciesFactory, DAOSpeciesFactory

All Known Implementing Classes:

DBDAOSingleSpeciesVariationFactory

public interface DAOVariationFactory
extends DAOSingleSpeciesFactory, DAOFactory

Method Summary

Methods

Modifier and Type	Method and Description
void	addVariationXRef(XRef daVariationXref)
VariationDAO	getVariationDAO()
XRef	getVariationXRef(Integer id)
VariationType	getVarTypeBySetID(Integer setID)
VariationType	getVarTypeBySOTerm(String soTerm)

Methods inherited from interface uk.ac.roslin.ensembl.dao.factory.DAOSingleSpeciesFactory

getGenus_Species, setGenus_Species

Methods inherited from interface uk.ac.roslin.ensembl.dao.factory.DAOSpeciesFactory

getSpecies, setSpecies

Methods inherited from interface uk.ac.roslin.ensembl.dao.factory.DAOFactory

getConfiguration, getDatabase, getDatabaseName, getDBType, getDBVersion, getEnsemblSchemaVersion, getMybatisSchemaFilePath, getNewSqlSession, getRegistry, setDatabaseName, setDBType, setDBVersion, setEnsemblSchemaVersion, setMybatisSchemaFilePath

Method Detail

getVariationDAO

VariationDAO getVariationDAO()
                             throws DAOException

Throws:

DAOException

getVariationXRef

XRef getVariationXRef(Integer id)

addVariationXRef

void addVariationXRef(XRef daVariationXref)

getVarTypeBySetID

VariationType getVarTypeBySetID(Integer setID)

getVarTypeBySOTerm

VariationType getVarTypeBySOTerm(String soTerm)