Uses of Interface
uk.ac.roslin.ensembl.model.database.Database

Packages that use Database

Package	Description
uk.ac.roslin.ensembl.dao.database
uk.ac.roslin.ensembl.dao.database.factory
uk.ac.roslin.ensembl.dao.factory
uk.ac.roslin.ensembl.model.core
uk.ac.roslin.ensembl.model.database

Uses of Database in uk.ac.roslin.ensembl.dao.database

Classes in uk.ac.roslin.ensembl.dao.database that implement Database

Modifier and Type	Class and Description
class	DBCollectionCoreDatabase
class	DBCollectionDatabase
class	DBComparisonDatabase
class	DBDatabase
class	DBSingleSpeciesCoreDatabase
class	DBSingleSpeciesDatabase
class	DBSingleSpeciesVariationDatabase

Methods in uk.ac.roslin.ensembl.dao.database with parameters of type Database

Modifier and Type	Method and Description
void	DBSpecies.addDatabase(Database database)
void	DBCollectionSpecies.addDatabase(Database database)
int	DBDatabase.compareTo(Database other)

Method parameters in uk.ac.roslin.ensembl.dao.database with type arguments of type Database

Modifier and Type	Method and Description
void	DBSpecies.addDatabases(TreeSet<? extends Database> databases)
void	DBCollectionSpecies.addDatabases(TreeSet<? extends Database> databases)

Uses of Database in uk.ac.roslin.ensembl.dao.database.factory

Fields in uk.ac.roslin.ensembl.dao.database.factory declared as Database

Modifier and Type	Field and Description
protected Database	DBDAOFactory.database

Methods in uk.ac.roslin.ensembl.dao.database.factory that return Database

Modifier and Type	Method and Description
Database	DBDAOFactory.getDatabase()

Methods in uk.ac.roslin.ensembl.dao.database.factory with parameters of type Database

Modifier and Type	Method and Description
void	DBDAOFactory.setDatabase(Database db)

Constructors in uk.ac.roslin.ensembl.dao.database.factory with parameters of type Database

Constructor and Description
DBDAOFactory(Database database)

Uses of Database in uk.ac.roslin.ensembl.dao.factory

Methods in uk.ac.roslin.ensembl.dao.factory that return Database

Modifier and Type	Method and Description
Database	DAOFactory.getDatabase()

Uses of Database in uk.ac.roslin.ensembl.model.core

Methods in uk.ac.roslin.ensembl.model.core that return Database

Modifier and Type	Method and Description
Database	Species.getDatabaseByTypeAndVersion(DatabaseType type, String version)

Methods in uk.ac.roslin.ensembl.model.core that return types with arguments of type Database

Modifier and Type	Method and Description
TreeSet<? extends Database>	Species.getDatabases()
TreeSet<? extends Database>	Species.getDatabasesByType(DatabaseType type)
TreeSet<? extends Database>	Species.getDatabasesByVersion(String version)

Methods in uk.ac.roslin.ensembl.model.core with parameters of type Database

Modifier and Type	Method and Description
void	Species.addDatabase(Database database)

Method parameters in uk.ac.roslin.ensembl.model.core with type arguments of type Database

Modifier and Type	Method and Description
void	Species.addDatabases(TreeSet<? extends Database> databases)

Uses of Database in uk.ac.roslin.ensembl.model.database

Subinterfaces of Database in uk.ac.roslin.ensembl.model.database

Modifier and Type	Interface and Description
interface	CollectionCoreDatabase
interface	CollectionDatabase
interface	ComparisonDatabase
interface	CoreDatabase
interface	DatabaseWithExternalDBs
interface	SingleSpeciesCoreDatabase
interface	SingleSpeciesDatabase
interface	SingleSpeciesVariationDatabase
interface	VariationDatabase

Methods in uk.ac.roslin.ensembl.model.database that return Database

Modifier and Type	Method and Description
Database	Registry.getDatabase(String species_name_or_alias)
Database	Registry.getDatabase(String species_name_or_alias, DatabaseType database_type, String db_version)
Database	Registry.getDatabase(String species_name_or_alias, String db_version)
Database	Registry.getDatabaseForFullName(String fullname)
Database	Registry.makeDatabase(String db_name)

Methods in uk.ac.roslin.ensembl.model.database that return types with arguments of type Database

Modifier and Type	Method and Description
TreeSet<? extends Database>	Registry.getDatabasesByType(DatabaseType type)