uk.ac.roslin.ensembl.mapper.core

Interface SequenceMapper

public interface SequenceMapper

Method Summary

Methods

Modifier and Type	Method and Description
List<Mapping>	getComponentSequences(HashMap parameters)
List<HashMap>	getPARSequences(HashMap parameters)
String	getSequence(HashMap parameters)
List<HashMap>	getSequenceByID(HashMap parameters)
String	getSequenceStart(HashMap parameters)
String	getSequenceStartStop(HashMap parameters)

Method Detail

getSequence

String getSequence(HashMap parameters)

getSequenceStart

String getSequenceStart(HashMap parameters)

getSequenceStartStop

String getSequenceStartStop(HashMap parameters)

getComponentSequences

List<Mapping> getComponentSequences(HashMap parameters)

getPARSequences

List<HashMap> getPARSequences(HashMap parameters)

getSequenceByID

List<HashMap> getSequenceByID(HashMap parameters)