001/** 002 * Copyright (C) 2010-2015 The Roslin Institute <contact andy.law@roslin.ed.ac.uk> 003 * 004 * This file is part of JEnsembl: a Java API to Ensembl data sources developed by the 005 * Bioinformatics Group at The Roslin Institute, The Royal (Dick) School of 006 * Veterinary Studies, University of Edinburgh. 007 * 008 * Project hosted at: http://jensembl.sourceforge.net 009 * 010 * This is free software: you can redistribute it and/or modify 011 * it under the terms of the GNU General Public License (version 3) as published by 012 * the Free Software Foundation. 013 * 014 * This software is distributed in the hope that it will be useful, 015 * but WITHOUT ANY WARRANTY; without even the implied warranty of 016 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 017 * GNU General Public License for more details. 018 * 019 * You should have received a copy of the GNU General Public License 020 * in this software distribution. If not, see: http://opensource.org/licenses/gpl-3.0.html 021 */ 022package uk.ac.roslin.ensembl.dao; 023 024import uk.ac.roslin.ensembl.model.core.CollectionOfSpecies; 025import uk.ac.roslin.ensembl.model.database.CollectionCoreDatabase; 026import java.util.List; 027import uk.ac.roslin.ensembl.exception.DAOException; 028import uk.ac.roslin.ensembl.model.core.Species; 029import uk.ac.roslin.ensembl.model.database.SingleSpeciesCoreDatabase; 030 031public interface DatabaseDAO { 032 033 public List<String> getDatabases() throws DAOException; 034 035 public List<String> getAllCoreDatabasesForVersion(int dbVersion) throws DAOException; 036 037 public Species getSpeciesProperties(SingleSpeciesCoreDatabase database) throws DAOException; 038 039 public CollectionOfSpecies getCollectionSpeciesProperties(CollectionCoreDatabase database) throws DAOException ; 040 041 042}